CDS

Accession Number TCMCG042C65310
gbkey CDS
Protein Id XP_016497446.1
Location join(8905..9056,9146..9247,9330..9375,10020..10109,11176..11241,11424..11492,13579..14031)
Gene LOC107816261
GeneID 107816261
Organism Nicotiana tabacum

Protein

Length 325aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016641960.1
Definition PREDICTED: exosome complex component RRP4 homolog [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category A
Description KH domain
KEGG_TC -
KEGG_Module M00390        [VIEW IN KEGG]
M00391        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K03679        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000176        [VIEW IN EMBL-EBI]
GO:0000177        [VIEW IN EMBL-EBI]
GO:0000178        [VIEW IN EMBL-EBI]
GO:0000288        [VIEW IN EMBL-EBI]
GO:0000291        [VIEW IN EMBL-EBI]
GO:0000459        [VIEW IN EMBL-EBI]
GO:0000460        [VIEW IN EMBL-EBI]
GO:0000466        [VIEW IN EMBL-EBI]
GO:0000467        [VIEW IN EMBL-EBI]
GO:0000469        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008298        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016073        [VIEW IN EMBL-EBI]
GO:0016074        [VIEW IN EMBL-EBI]
GO:0016075        [VIEW IN EMBL-EBI]
GO:0016078        [VIEW IN EMBL-EBI]
GO:0016180        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031125        [VIEW IN EMBL-EBI]
GO:0031126        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034427        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034472        [VIEW IN EMBL-EBI]
GO:0034475        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0034661        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043144        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043628        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0043633        [VIEW IN EMBL-EBI]
GO:0043634        [VIEW IN EMBL-EBI]
GO:0043928        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0060147        [VIEW IN EMBL-EBI]
GO:0060149        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060968        [VIEW IN EMBL-EBI]
GO:0060969        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071025        [VIEW IN EMBL-EBI]
GO:0071027        [VIEW IN EMBL-EBI]
GO:0071028        [VIEW IN EMBL-EBI]
GO:0071029        [VIEW IN EMBL-EBI]
GO:0071031        [VIEW IN EMBL-EBI]
GO:0071033        [VIEW IN EMBL-EBI]
GO:0071034        [VIEW IN EMBL-EBI]
GO:0071035        [VIEW IN EMBL-EBI]
GO:0071038        [VIEW IN EMBL-EBI]
GO:0071043        [VIEW IN EMBL-EBI]
GO:0071046        [VIEW IN EMBL-EBI]
GO:0071049        [VIEW IN EMBL-EBI]
GO:0071051        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090503        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1905354        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGAGGCGTACAACTACCTTTCAGCAACACCCAAAAGCTAAGATACGAAAGAGCATTGGCGCAGTTGGAATCCCTTTCTTCAAAAGTTAATACCAATGCCACTGTCATTGTCGCTGACACCATCCCCGTCGACGAAGATGGCGCCCTCAAGGGACACGGTACATTGGATATGGGCAAGAATGTGGTAGCAACTGTCTGTGGAGTGGTTGAGCGCGTGAATAAGCTTGTCTATGTTCGATCTTTAAGGGCCAGGTATAAGCCAGAAATTGGTGATATTATAGTTGGCCGTGTTATTGAGGTTGCTCCAAAGAGATGGAGATTGGAAATTAATTTCAGCCAAGACGCCGTACTAATGCTCTCTTCAATGAATCTGCCAGATGGTATTCAGAGGAGGCGAACTGCAATTGATGAACTCAATATGCGAACCATATTCGTGGAGAATGATGTCATCTGTGCTGAAGTCCGTGGTTTCCAGCATGATGGCAGTCTACACCTCCAAGCTAGAAGTCAAAAGTATGGAAAGCTTGAAAGAGGGCGACTACTCACAATCCCTCCATATCTAGTGAAGAGGCGTAAACAGCATTTCCACCATCTAGATCAGTATGGAGTTGACTTGATACTTGGCTGCAATGGATTTATTTGGATTGGGGAACATGTTGAAGTAAAAGATGCCATGGTAGAGGATCAAGTAAATAAGTCTGATCCAGAGAACACCCATTCAGGAAGCTTACCGGATTCTAGTGAAGAACCGACTTCTACACCACCGGAAACAAGACAATATATATGCAGGATAGCAAATGCCATCACGGTATTCGCTGCTTTAGACTTCATGGTTACTTTGGAGGGTGTAATAGAGATGGTTAACTTGAGCTTGTCTTTGAACCTTGGTGTGGATGAGATGCTTAACGCAGAATTCCATGTTCAAGTTGCTGAGAAAGAAGCTGAACGACGGAGCACGTTGACAAAAAGAAGATAG
Protein:  
MRGVQLPFSNTQKLRYERALAQLESLSSKVNTNATVIVADTIPVDEDGALKGHGTLDMGKNVVATVCGVVERVNKLVYVRSLRARYKPEIGDIIVGRVIEVAPKRWRLEINFSQDAVLMLSSMNLPDGIQRRRTAIDELNMRTIFVENDVICAEVRGFQHDGSLHLQARSQKYGKLERGRLLTIPPYLVKRRKQHFHHLDQYGVDLILGCNGFIWIGEHVEVKDAMVEDQVNKSDPENTHSGSLPDSSEEPTSTPPETRQYICRIANAITVFAALDFMVTLEGVIEMVNLSLSLNLGVDEMLNAEFHVQVAEKEAERRSTLTKRR